Thought this may be useful to some, and apologies if this has been mentioned previously (I'll admit, I haven't read the entire thread, but was frantically hopping around the posts for advice most of today).
Check your electrical connection to the fuel filter!!! You may get lucky.
Just had a stressful day today after the WIF light came on upon startup this morning. It wasn't there the last night, after I gave the van two successful startups / short idles after working on it. I spent some time yesterday replacing all 6 glow plugs, and installed a new fuel filter. Then when I went to leave this morning, I got the WIF message as soon as it started?!!? I didn't know how sever it could be, so I started driving. I figured it was from the nasty gas station I stopped at the day before. A last minute stop to get fuel just incase I ran out before getting home (yes I was very low and pushing it). It was a Space Age, and the diesel pump was so bad I almost took a photo to show my wife. You know the ones absolutely covered in grime and looking like a crime scene. But I figured that must mean people use it often, right? Anyway, to keep this short, I was stressing so I pulled over, googled what to do, read this post and others, freaked out, but had a container on hand so I did the drain water from gas thing. Didn't get too much the first time and WIF still came on, so I opened the lock nut more and did it again, but the fuel drain line blew out of the nut thing, and diesel sprayed everywhere in the engine (you know I was sitting in the drivers seat with the hood up and didn't realize). What a mess. I drove on, telling myself it cant be that bad with a little moisture in the fuel....
Anywho, stopped at a parts store on the way home, bought another fuel filter, some degreaser, and stopped at a DIY car wash I passed on the way home and cleaned up the engine. Got home, went to change the fuel filter - and there was the connector.... NOT connected. An oversight by me the day before when I was reassembling everything. I reconnected and started the engine, and all is good. Unless I'm stuck in a grounhog day and this bullshit will repeat tomorrow

So if you made it this far, I guess the auto default could be WIF warning if there is a break in the wiring. Keep that in mind if you are trouble shooting.
I also noted the fuel filter I used yesterday did not have the usual caps on? The replacement I bought today does, so it confirms what I recall always seeing. Not sure why that is, but you know, my mind was feverishly looking for any and all possibilities. Thought maybe it was a returned fuel filter I'd ended up with.
Good luck to anyone experiencing this issue. Crazy to think that so much harm can be caused by a gas station with water getting in their tanks. Living in the PNW, and with environmental engineering friends who work on gas station sites, it can happen.